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Registro Completo |
Biblioteca(s): |
Embrapa Agricultura Digital. |
Data corrente: |
09/02/2011 |
Data da última atualização: |
24/01/2020 |
Tipo da produção científica: |
Resumo em Anais de Congresso |
Autoria: |
NESHICH, G. |
Afiliação: |
GORAN NESHICH, CNPTIA. |
Título: |
Multiple Structures - Selected Parameter (MSSP) 2D Plot. |
Ano de publicação: |
2010 |
Fonte/Imprenta: |
In: EMBO WORKSHOP ON VISUALIZING BIOLOGICAL DATA, 2010, Germany. Posters. |
Páginas: |
2 p. |
Idioma: |
Inglês |
Notas: |
T25. VIZBI 2010. |
Conteúdo: |
The Multiple Structures - Single Parameter 2D module allows a user to compare, in a simple yet intuitive 2D plot, any one of the 150 different sequence, structure, function and stability parameters / descriptors, stored in STING_DB, for any protein structure deposited in the PDB. The 2D plot shows (for a selected parameter / descriptor) the numerical values in the Y-axis and the sequence residue numbers for structurally aligned proteins, in the X-axis. The MSSP module is a part of the improved Blue Star STING protein structure analysis computer interface and DB (which contains per-residue-reported descriptors (available for display both numerically and graphically) for either the public protein data base (the PDB)) or local files. The MSSP allows a user to select a parameter and to compare its values at corresponding 3d location in structurally aligned proteins. As a consequence, a user may observe / compare characteristics of nano-environment within macromolecular 3D constellation. A user may also evaluate how good is the 3D alignment based on synchrony in physical chemical characteristics of corresponding 3D locations in proteins previously aligned structurally. http://www.cbi.cnptia.embrapa.br/SMS/ |
Palavras-Chave: |
Estrutura de proteínas; Sting. |
Thesaurus Nal: |
Protein structure. |
Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/32525/1/t25.pdf
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Marc: |
LEADER 01729nam a2200169 a 4500 001 1876488 005 2020-01-24 008 2010 bl uuuu u00u1 u #d 100 1 $aNESHICH, G. 245 $aMultiple Structures - Selected Parameter (MSSP) 2D Plot.$h[electronic resource] 260 $aIn: EMBO WORKSHOP ON VISUALIZING BIOLOGICAL DATA, 2010, Germany. Posters.$c2010 300 $a2 p. 500 $aT25. VIZBI 2010. 520 $aThe Multiple Structures - Single Parameter 2D module allows a user to compare, in a simple yet intuitive 2D plot, any one of the 150 different sequence, structure, function and stability parameters / descriptors, stored in STING_DB, for any protein structure deposited in the PDB. The 2D plot shows (for a selected parameter / descriptor) the numerical values in the Y-axis and the sequence residue numbers for structurally aligned proteins, in the X-axis. The MSSP module is a part of the improved Blue Star STING protein structure analysis computer interface and DB (which contains per-residue-reported descriptors (available for display both numerically and graphically) for either the public protein data base (the PDB)) or local files. The MSSP allows a user to select a parameter and to compare its values at corresponding 3d location in structurally aligned proteins. As a consequence, a user may observe / compare characteristics of nano-environment within macromolecular 3D constellation. A user may also evaluate how good is the 3D alignment based on synchrony in physical chemical characteristics of corresponding 3D locations in proteins previously aligned structurally. http://www.cbi.cnptia.embrapa.br/SMS/ 650 $aProtein structure 653 $aEstrutura de proteínas 653 $aSting
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Registro original: |
Embrapa Agricultura Digital (CNPTIA) |
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Registros recuperados : 186 | |
4. | | NESHICH, G. Computational biology in Brazil. PLoS Computational Biology, v. 3, n. 10, p. 1845-1848, Oct. 2007.Tipo: Artigo em Periódico Indexado | Circulação/Nível: Internacional - C |
Biblioteca(s): Embrapa Agricultura Digital. |
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8. | | MAZONI, I.; NESHICH, G. DPIN: um dicionário dos nanoambientes internos das proteínas e seu potencial para transformação em ativos para a agricultura. In: MASSRUHÁ, S. M. F. S.; LEITE, M. A. de A.; OLIVEIRA, S. R. de M.; MEIRA, C. A. A.; LUCHIARI JUNIOR, A.; BOLFE, E. L. (Ed.). Agricultura digital: pesquisa, desenvolvimento e inovação nas cadeias produtivas. Brasília, DF: Embrapa, 2020. cap. 9, p. 218-232.Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Agricultura Digital. |
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9. | | MAZONI, I.; NESHICH, G. DIPN: a dictionary of the internal proteins nanoenvironments and their potential for transformation into agricultural assets. In: MASSRUHÁ, S. M. F. S.; LEITE, M. A. de A.; OLIVEIRA, S. R. de M.; MEIRA, C. A. A.; LUCHIARI JUNIOR, A.; BOLFE, E. L. (ed.). Digital agriculture: research, development and innovation in production chains. Brasília, DF: Embrapa, 2023. cap. 9, p. 165-177.Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Agricultura Digital. |
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Registros recuperados : 186 | |
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